| 2023 | Nam June Paik: Moon Is the Oldest TV | Self (archive footage) | ★ 6.9 |
| 2022 | Please Leave a Message: Anthology Film Archives Voicemails Through the Ages | | ★ 0.0 |
| 2022 | Jono Meko antologija | Jonas Mekas | ★ 0.0 |
| 2022 | Fragments of Paradise | Self (archive footage) | ★ 6.7 |
| 2022 | Film: The Living Record of Our Memory | Self | ★ 8.6 |
| 2022 | 眩暈 Vertigo | | ★ 0.0 |
| 2022 | Notes for a Déjà vu | | ★ 0.0 |
| 2021 | Sugrįžę iš Niujorko | Himself | ★ 0.0 |
| 2021 | The Velvet Underground | Self | ★ 6.8 |
| 2021 | The Invisible Father | Self (archive footage) | ★ 0.0 |
| 2020 | Tapes | | ★ 0.0 |
| 2020 | Tiny Tim | Himself | ★ 6.1 |
| 2019 | Elegy for J.M. | | ★ 0.0 |
| 2019 | Sebastian and Jonas Leaving the Party | | ★ 0.0 |
| 2019 | Cinema and Sanctuary | Self | ★ 0.0 |
| 2019 | Self Discovery for Social Survival | Narrator (voice) | ★ 5.4 |
| 2019 | Gena Rowlands — Unabhängig im Kino und im Leben | Self | ★ 7.2 |
| 2019 | Makeshift (for Mekas) | | ★ 6.0 |
| 2019 | Last Interview Film of Jonas Mekas/version 1 | Self | ★ 0.0 |
| 2019 | Keep singing: a tribute to Jonas Mekas | | ★ 0.0 |
| 2019 | 3 Friends Singing (...in the Desert) | | ★ 0.0 |
| 2019 | Jonas Towards Broadway | | ★ 0.0 |
| 2018 | Beyond the Bolex - Er nannte sie Bolex | Self | ★ 7.0 |
| 2018 | Barbara Rubin and the Exploding NY Underground | | ★ 0.0 |
| 2018 | George | Self | ★ 7.0 |
| 2018 | Nitsch | | ★ 0.0 |
| 2017 | I Don't Know Which Tree It Comes From that Fragrance | Self | ★ 8.0 |
| 2016 | On the Holy Spirit | | ★ 0.0 |
| 2016 | EXPRMNTL | himself | ★ 0.0 |
| 2016 | I Had Nowhere to Go | Himself | ★ 0.0 |
| 2016 | Reminiscences of Jonas Mekas | Self | ★ 0.0 |
| 2015 | A Day in the Life of Andy Warhol | Self | ★ 5.0 |
| 2015 | A Report from Venice | | ★ 0.0 |
| 2015 | All About Bolex | | ★ 0.0 |
| 2014 | My Birthday | | ★ 6.0 |
| 2014 | River of Fundament | Wake Guest | ★ 6.6 |
| 2013 | Walden | Self | ★ 7.5 |
| 2013 | Walden | self | ★ 7.5 |
| 2013 | Mes entretiens filmés | Himself | ★ 3.2 |
| 2013 | What Is Cinema? | Self | ★ 6.4 |
| 2012 | Out-Takes from the Life of a Happy Man | Jonas Mekas | ★ 6.5 |
| 2012 | Maya Deren, Take Zero | Himself | ★ 5.0 |
| 2012 | Reminiszenzen aus Deutschland | Himself | ★ 0.0 |
| 2011 | My Mars Bar Movie | himself | ★ 0.0 |
| 2011 | 3.11 A Sense of Home | Himself (voice) (segment "Mt. Ventoux") | ★ 6.5 |
| 2011 | Free Radicals: A History of Experimental Film | Himself | ★ 6.7 |
| 2011 | Correspondencia Jonas Mekas - J.L. Guerin | Himself | ★ 7.0 |
| 2011 | Guest | Self | ★ 6.0 |
| 2011 | Re: Maciunas and Fluxus | | ★ 0.0 |
| 2010 | Portrait Serie - Jonas Mekas | himself | ★ 0.0 |
| 2010 | New York Conversations | | ★ 0.0 |
| 2010 | Lavender | Self | ★ 0.0 |
| 2010 | Visionaries | Himself | ★ 6.0 |
| 2009 | Jonas Mekas in Kodachrome Days | Himself | ★ 6.5 |
| 2009 | It Came from Kuchar | Self (archive footage) | ★ 7.0 |
| 2009 | The Signing | | ★ 0.0 |
| 2009 | The Perfect Team: The Making of 'On the Bowery' | Self | ★ 0.0 |
| 2008 | Doc | Himself | ★ 0.0 |
| 2008 | Question a Day | | ★ 0.0 |
| 2008 | Andy Warhol's Factory People... Inside the Sixties Silver Factory | | ★ 3.5 |
| 2008 | Notes on an American Film Director at Work | Self | ★ 5.6 |
| 2007 | 365 Day Project | Self | ★ 10.0 |
| 2007 | Sunday December 30, 2007 | Self | ★ 0.0 |
| 2007 | Jack Smith and the Destruction of Atlantis | Self | ★ 6.6 |
| 2007 | Tuesday Jan. 9, 2007 | Self | ★ 0.0 |
| 2006 | Salvador Dalí at Work | Self | ★ 5.0 |
| 2006 | The Song of Central Park | Himself (voice) | ★ 0.0 |
| 2006 | Anger Me | Himself | ★ 8.8 |
| 2006 | Notes on Marie Menken | Self | ★ 5.4 |
| 2006 | Who Gets to Call It Art? | Self | ★ 6.7 |
| 2006 | Meet The Kuchar Brothers | | ★ 0.0 |
| 2005 | The Definition of Insanity | | ★ 10.0 |
| 2005 | Excavating Taylor Mead | Self | ★ 0.0 |
| 2004 | A Letter from Greenpoint | Mekas | ★ 0.0 |
| 2003 | Not in Our Name | himself | ★ 0.0 |
| 2003 | Axiom of Choice | Self | ★ 0.0 |
| 2002 | Jonas tourne toujours | Himself | ★ 5.0 |
| 2002 | Im Spiegel der Maya Deren | Himself | ★ 7.4 |
| 2002 | Pastabos gyvenimo būdo paraštėse | | ★ 0.0 |
| 2001 | TO NEW YORK WITH LOVE - A Letter to Penny Arcade June 25, 2001 | | ★ 6.0 |
| 2000 | As I Was Moving Ahead, Occasionally I Saw Brief Glimpses of Beauty | Narrator (voice) | ★ 7.7 |
| 2000 | Requiem for a Manual Typewriter | Himself | ★ 0.0 |
| 1999 | Letter to John from Jonas | | ★ 0.0 |
| 1999 | Laboratorium Anthology | Himself | ★ 0.0 |
| 1998 | Song of Avignon | Self | ★ 7.6 |
| 1998 | My Country is Cinema | Self | ★ 0.0 |
| 1997 | Scenes from Allen's Last Three Days on Earth as a Spirit | Self | ★ 5.2 |
| 1997 | Ginsberg - egy költö a Lower East Side-ról | Self | ★ 0.0 |
| 1996 | Friday The 13 Okt, Jonas Mekas | Himself | ★ 0.0 |
| 1996 | Reminiscences of a Journey to Lithuania | Self | ★ 6.9 |
| 1996 | Michael Snow Up Close | Himself | ★ 6.0 |
| 1996 | Cinema Is Not 100 Years Old | Himself | ★ 0.0 |
| 1995 | Nico Icon | Himself | ★ 7.5 |
| 1994 | Jonas in the Desert | Self | ★ 5.5 |
| 1992 | Zefiro Torna or Scenes from the Life of George Maciunas (Fluxus) | | ★ 5.8 |
| 1992 | Award | Himself | ★ 0.0 |
| 1991 | Just Visiting This Planet | | ★ 0.0 |
| 1991 | Quartet Number One | | ★ 7.5 |
| 1991 | Interview and Reading: Jonas Mekas | Himself | ★ 0.0 |
| 1990 | Step Across the Border | Butterfly Wing | ★ 7.9 |
| 1990 | Superstar: The Life and Times of Andy Warhol | Self | ★ 7.3 |
| 1989 | Belladonna | | ★ 0.0 |
| 1989 | Warhol's Cinema 1963-1968: Mirror for the Sixties | Self | ★ 0.0 |
| 1986 | Invocation: Maya Deren | Himself | ★ 5.0 |
| 1986 | He Stands in a Desert Counting the Seconds of His Life | Self (archive footage) | ★ 8.2 |
| 1986 | Fire in the East: A Portrait of Robert Frank | Self | ★ 0.0 |
| 1985 | Home Movies 1971-81 | | ★ 0.0 |
| 1984 | Persistence of Vision | Self | ★ 0.0 |
| 1981 | Strong Medicine | | ★ 5.6 |
| 1981 | The Queen of Sheba Meets the Atom Man | | ★ 6.0 |
| 1980 | No. 18: Mahagonny | Self | ★ 5.5 |
| 1980 | Self-Portrait | Himself | ★ 0.0 |
| 1980 | J. Mekas | Self | ★ 0.0 |
| 1979 | ORG | Self (archive footage) | ★ 5.3 |
| 1979 | Paradise Not Yet Lost | Himself | ★ 0.0 |
| 1978 | Cinématon | N°1590 | ★ 4.3 |
| 1978 | Four Shadows | | ★ 7.0 |
| 1978 | Notes for Jerome | Self | ★ 0.0 |
| 1976 | Lost, Lost, Lost | Self | ★ 7.0 |
| 1975 | Cartoline dall'America | | ★ 0.0 |
| 1974 | ‘Rameau’s Nephew’ by Diderot (Thanx to Dennis Young) by Wilma Schoen | | ★ 7.9 |
| 1972 | Imagine | Self | ★ 7.0 |
| 1972 | Going Home | Himself | ★ 5.4 |
| 1971 | Journey to Lithuania | Himself | ★ 0.0 |
| The Lamb | Self | ★ 0.0 |
| 1970 | Occhio privato sul nuovo mondo | | ★ 0.0 |
| Viva Jonas! | Himself | ★ 0.0 |
| 1970 | A Matter of Baobab | | ★ 0.0 |
| Cinématon n°1590 : Jonas Mekas | | ★ 0.0 |
| 1969 | Filmmakers | Himself | ★ 0.0 |
| 1968 | Jonas | Himself | ★ 0.0 |
| 1968 | Underground New York | Self | ★ 0.0 |
| 1967 | The Song of Avila | Narrator | ★ 6.4 |
| 1967 | Poem Posters | Self | ★ 0.0 |
| 1966 | Screen Test [ST211]: Jonas Mekas | himself | ★ 0.0 |
| 1966 | Galaxie | Self | ★ 0.0 |
| 1966 | The Love Merchant | Lounge Patron | ★ 4.9 |
| 1965 | Andy Warhol Screen Tests | Self | ★ 8.0 |
| 1965 | Dirt | | ★ 8.0 |
| 1965 | Jonas in the Brig | Himself | ★ 0.0 |
| 1965 | Award Presentation to Andy Warhol | Self | ★ 7.0 |
| 1965 | Empire | Self (uncredited) | ★ 4.2 |
| 1962 | Diane the Zebra Woman | | ★ 9.0 |
| 1961 | The Sin of Jesus | | ★ 4.8 |
